make_prg
A tool to create and update PRGs for input to Pandora from a set of Multiple
Sequence Alignments.
Location and version:
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$ which make_prg
/local/cluster/bin/make_prg
$ make_prg --version
0.3.0
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help message:
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$ make_prg --help
usage: make_prg <subcommand> <options>
Subcommand entrypoint
optional arguments:
-h, --help show this help message and exit
-V, --version show program's version number and exit
Available subcommands:
from_msa Make PRG from multiple sequence alignment dir
update Update PRGs given new sequences output by pandora.
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software ref: https://github.com/leoisl/make_prg
research ref: https://doi.org/10.1186/s13059-021-02473-1