make_prg 0.3.0

make_prg

A tool to create and update PRGs for input to Pandora from a set of Multiple Sequence Alignments.

Location and version:

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$ which make_prg
/local/cluster/bin/make_prg
$ make_prg --version
0.3.0

help message:

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$ make_prg --help
usage: make_prg <subcommand> <options>

Subcommand entrypoint

optional arguments:
  -h, --help     show this help message and exit
  -V, --version  show program's version number and exit

Available subcommands:

    from_msa     Make PRG from multiple sequence alignment dir
    update       Update PRGs given new sequences output by pandora.

software ref: https://github.com/leoisl/make_prg
research ref: https://doi.org/10.1186/s13059-021-02473-1