Center for Quantitative Life Sciences @ Oregon State University - Software Updates
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Center for Quantitative Life Sciences @ Oregon State University - Software Updates
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 compiled

2023

minimap2 2.26 11-18
Sweepfinder2 05-31
NextDenovo 2.5.2 04-12
muscle 5.1.0 01-11
bppsuite rel 299 01-05

2022

vsearch 2.22.1 11-09
Samtools 1.16.1 09-12
treemix 1.13 09-01
fastp 0.23.2 08-08
mummer 4 07-18
diamond 2.0.15 07-05
MEGAHIT 1.2.9 06-03
infernal 1.1.4 05-25
HMMER 3.3.2 05-25
BLAST+ 2.13.0 05-13
Salmon 1.8.0 05-03
polypolish 0.5.0 02-04
LINKS 2.0.0 01-31
MMseqs2 75af0 01-13

2021

w2rap contigger 0.1 12-28
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